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Cluster: GH102_22_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_259947 k141_259947_5 5168 6196 + GT9
pfam k141_259947 k141_259947_6 6300 7748 + PG_binding_1 | Exonuc_VII_L
CAZyme k141_259947 k141_259947_7 7828 8826 + GT100
pfam k141_259947 k141_259947_8 8836 10119 + Polysacc_synt | Polysacc_synt_3
pfam k141_259947 k141_259947_9 10132 10854 + CTP_transf_3
TC k141_259947 k141_259947_10 11031 12428 + 2.A.25.1.5
TC k141_259947 k141_259947_11 12625 14388 + 3.D.10.1.4
pfam k141_259947 k141_259947_12 15047 15790 + MORN_2 | MORN_2 | MORN_2 | MORN_2 | MORN_2 | MORN_2 | MORN_2 | MORN_2
pfam k141_259947 k141_259947_13 15827 17056 - Sigma54_AID | Sigma54_DBD | Sigma54_CBD
TC k141_259947 k141_259947_14 17158 18789 - 2.A.58.2.2
Gene ID: k141_259947_5
Type: CAZyme
Location: 5168 - 6196 (+)
Gene ID: k141_259947_6
Type: pfam
Location: 6300 - 7748 (+)
Gene ID: k141_259947_7
Type: CAZyme
Location: 7828 - 8826 (+)
Gene ID: k141_259947_8
Type: pfam
Location: 8836 - 10119 (+)
Gene ID: k141_259947_9
Type: pfam
Location: 10132 - 10854 (+)
Gene ID: k141_259947_10
Type: TC
Location: 11031 - 12428 (+)
Gene ID: k141_259947_11
Type: TC
Location: 12625 - 14388 (+)
Gene ID: k141_259947_12
Type: pfam
Location: 15047 - 15790 (+)
Gene ID: k141_259947_13
Type: pfam
Location: 15827 - 17056 (-)
Gene ID: k141_259947_14
Type: TC
Location: 17158 - 18789 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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