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Cluster: GH102_22_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_237199 k141_237199_1 149 985 + 3.A.1.1.6
CAZyme k141_237199 k141_237199_2 1015 2517 + GH77
CAZyme k141_237199 k141_237199_3 2536 4356 + CBM34 | GH13_20
TF k141_237199 k141_237199_4 4425 5237 + TrmB
CAZyme k141_237199 k141_237199_5 5380 7956 + CBM41 | GH13_14
CAZyme k141_237199 k141_237199_6 8008 10263 + GT35
CAZyme k141_237199 k141_237199_7 10404 12311 + CBM48 | GH13_9
Gene ID: k141_237199_1
Type: TC
Location: 149 - 985 (+)
Gene ID: k141_237199_2
Type: CAZyme
Location: 1015 - 2517 (+)
Gene ID: k141_237199_3
Type: CAZyme
Location: 2536 - 4356 (+)
Gene ID: k141_237199_4
Type: TF
Location: 4425 - 5237 (+)
Gene ID: k141_237199_5
Type: CAZyme
Location: 5380 - 7956 (+)
Gene ID: k141_237199_6
Type: CAZyme
Location: 8008 - 10263 (+)
Gene ID: k141_237199_7
Type: CAZyme
Location: 10404 - 12311 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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