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Cluster: GH102_22_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_152174 k141_152174_4 3403 4803 + 2.A.118.1.4
pfam k141_152174 k141_152174_5 5126 5914 - PNP_UDP_1
CAZyme k141_152174 k141_152174_6 6192 7532 + GH4
TC k141_152174 k141_152174_7 7547 9121 + 4.A.1.1.13
TF k141_152174 k141_152174_8 9138 9920 + HTH_6
TC k141_152174 k141_152174_9 10135 10890 + 3.A.1.17.4
TC k141_152174 k141_152174_10 10892 11677 + 3.A.1.17.1
pfam k141_152174 k141_152174_11 11691 12482 + PNP_UDP_1
TC k141_152174 k141_152174_12 12486 13493 + 3.A.1.17.11
TC k141_152174 k141_152174_13 13508 14263 + 3.A.1.17.7
pfam k141_152174 k141_152174_14 14344 15261 - Mem_trans
TF k141_152174 k141_152174_15 15543 16331 - 0040266
TC k141_152174 k141_152174_16 16623 17579 + 2.A.10.1.2
Gene ID: k141_152174_4
Type: TC
Location: 3403 - 4803 (+)
Gene ID: k141_152174_5
Type: pfam
Location: 5126 - 5914 (-)
Gene ID: k141_152174_6
Type: CAZyme
Location: 6192 - 7532 (+)
Gene ID: k141_152174_7
Type: TC
Location: 7547 - 9121 (+)
Gene ID: k141_152174_8
Type: TF
Location: 9138 - 9920 (+)
Gene ID: k141_152174_9
Type: TC
Location: 10135 - 10890 (+)
Gene ID: k141_152174_10
Type: TC
Location: 10892 - 11677 (+)
Gene ID: k141_152174_11
Type: pfam
Location: 11691 - 12482 (+)
Gene ID: k141_152174_12
Type: TC
Location: 12486 - 13493 (+)
Gene ID: k141_152174_13
Type: TC
Location: 13508 - 14263 (+)
Gene ID: k141_152174_14
Type: pfam
Location: 14344 - 15261 (-)
Gene ID: k141_152174_15
Type: TF
Location: 15543 - 16331 (-)
Gene ID: k141_152174_16
Type: TC
Location: 16623 - 17579 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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