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Cluster: GH099_145_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_352512 k141_352512_47 55464 56891 + 2.A.22.5.3
NULL(UNKNOWN) k141_352512 k141_352512_48 57013 57558 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_352512 k141_352512_49 57678 59054 + FAD-depend_C
TC k141_352512 k141_352512_50 59209 60168 + 3.A.1.103.1
TC k141_352512 k141_352512_51 60182 60949 + 3.A.1.103.1
CAZyme k141_352512 k141_352512_52 60939 62807 + GT2 | GT2
STP k141_352512 k141_352512_53 63021 63233 + FeoA
STP k141_352512 k141_352512_54 63259 63483 + FeoA
TC k141_352512 k141_352512_55 63552 66068 + 9.A.8.1.6
Gene ID: k141_352512_47
Type: TC
Location: 55464 - 56891 (+)
Gene ID: k141_352512_48
Type:
Location: 57013 - 57558 (+)
Gene ID: k141_352512_49
Type: pfam
Location: 57678 - 59054 (+)
Gene ID: k141_352512_50
Type: TC
Location: 59209 - 60168 (+)
Gene ID: k141_352512_51
Type: TC
Location: 60182 - 60949 (+)
Gene ID: k141_352512_52
Type: CAZyme
Location: 60939 - 62807 (+)
Gene ID: k141_352512_53
Type: STP
Location: 63021 - 63233 (+)
Gene ID: k141_352512_54
Type: STP
Location: 63259 - 63483 (+)
Gene ID: k141_352512_55
Type: TC
Location: 63552 - 66068 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_352512_54 vegetarian > omnivore 1.06138 0.04014

🧭 Explore Read Mapping of CGC

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