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Cluster: GH099_145_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_279894 k141_279894_22 22581 25097 + GT35
pfam k141_279894 k141_279894_23 25170 26141 - PAP2
TC k141_279894 k141_279894_24 26556 27956 + 2.A.2.3.1
peptidase k141_279894 k141_279894_25 27978 29306 + S09.UPW
CAZyme k141_279894 k141_279894_26 29306 31609 + GH31_2
TF k141_279894 k141_279894_27 31797 32480 - HTH_3
STP k141_279894 k141_279894_28 32812 33036 + FeoA
TC k141_279894 k141_279894_29 33065 35074 + 9.A.8.1.6
Gene ID: k141_279894_22
Type: CAZyme
Location: 22581 - 25097 (+)
Gene ID: k141_279894_23
Type: pfam
Location: 25170 - 26141 (-)
Gene ID: k141_279894_24
Type: TC
Location: 26556 - 27956 (+)
Gene ID: k141_279894_25
Type: peptidase
Location: 27978 - 29306 (+)
Gene ID: k141_279894_26
Type: CAZyme
Location: 29306 - 31609 (+)
Gene ID: k141_279894_27
Type: TF
Location: 31797 - 32480 (-)
Gene ID: k141_279894_28
Type: STP
Location: 32812 - 33036 (+)
Gene ID: k141_279894_29
Type: TC
Location: 33065 - 35074 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_279894_24 vegan > omnivore 4.25518 0.04185
k141_279894_24 vegetarian > omnivore 4.71248 0.04014
k141_279894_25 vegan > omnivore 6.34663 0.04185
k141_279894_25 vegetarian > omnivore 6.90363 0.04014
k141_279894_26 vegan > omnivore 7.14350 0.04185
k141_279894_26 vegetarian > omnivore 7.58343 0.04014

🧭 Explore Read Mapping of CGC

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