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Cluster: GH090_93_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_88904 k141_88904_1 4622 6202 + 3.A.1.5.3
TC k141_88904 k141_88904_2 6268 7203 + 3.A.1.5.3
TC k141_88904 k141_88904_3 7207 8031 + 3.A.1.5.43
TC k141_88904 k141_88904_4 8028 8855 + 3.A.1.5.33
TC k141_88904 k141_88904_5 8852 9631 + 3.A.1.5.43
CAZyme k141_88904 k141_88904_6 9799 10650 + CE4
pfam k141_88904 k141_88904_7 10659 11153 + MoCF_biosynth
pfam k141_88904 k141_88904_8 11232 11861 + PhoU_div
TC k141_88904 k141_88904_9 11854 12852 + 2.A.20.1.5
TF k141_88904 k141_88904_10 13023 13475 + Rrf2
TC k141_88904 k141_88904_11 13533 14921 + 3.D.4.3.2
TC k141_88904 k141_88904_12 14912 15931 + 3.D.4.3.2
TC k141_88904 k141_88904_13 16056 19595 + 3.A.1.129.1
Gene ID: k141_88904_1
Type: TC
Location: 4622 - 6202 (+)
Gene ID: k141_88904_2
Type: TC
Location: 6268 - 7203 (+)
Gene ID: k141_88904_3
Type: TC
Location: 7207 - 8031 (+)
Gene ID: k141_88904_4
Type: TC
Location: 8028 - 8855 (+)
Gene ID: k141_88904_5
Type: TC
Location: 8852 - 9631 (+)
Gene ID: k141_88904_6
Type: CAZyme
Location: 9799 - 10650 (+)
Gene ID: k141_88904_7
Type: pfam
Location: 10659 - 11153 (+)
Gene ID: k141_88904_8
Type: pfam
Location: 11232 - 11861 (+)
Gene ID: k141_88904_9
Type: TC
Location: 11854 - 12852 (+)
Gene ID: k141_88904_10
Type: TF
Location: 13023 - 13475 (+)
Gene ID: k141_88904_11
Type: TC
Location: 13533 - 14921 (+)
Gene ID: k141_88904_12
Type: TC
Location: 14912 - 15931 (+)
Gene ID: k141_88904_13
Type: TC
Location: 16056 - 19595 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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