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Cluster: GH080_bin.45_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_123403 k141_123403_13 11849 13609 + 3.A.1.135.5
TC k141_123403 k141_123403_14 13609 15510 + 3.A.1.135.5
TF k141_123403 k141_123403_15 15568 16446 - HTH_AraC | HTH_AraC
CAZyme k141_123403 k141_123403_16 16643 18898 + GT35
TF k141_123403 k141_123403_17 19024 20580 + HTH_AraC | HTH_AraC
TC k141_123403 k141_123403_18 20567 22288 + 8.A.59.2.1
STP k141_123403 k141_123403_19 22416 23705 + SBP_bac_1
TC k141_123403 k141_123403_20 23810 25183 + 3.A.1.1.27
TC k141_123403 k141_123403_21 25183 26055 + 3.A.1.1.27
TC k141_123403 k141_123403_22 26070 27731 + 3.A.1.1.9
Gene ID: k141_123403_13
Type: TC
Location: 11849 - 13609 (+)
Gene ID: k141_123403_14
Type: TC
Location: 13609 - 15510 (+)
Gene ID: k141_123403_15
Type: TF
Location: 15568 - 16446 (-)
Gene ID: k141_123403_16
Type: CAZyme
Location: 16643 - 18898 (+)
Gene ID: k141_123403_17
Type: TF
Location: 19024 - 20580 (+)
Gene ID: k141_123403_18
Type: TC
Location: 20567 - 22288 (+)
Gene ID: k141_123403_19
Type: STP
Location: 22416 - 23705 (+)
Gene ID: k141_123403_20
Type: TC
Location: 23810 - 25183 (+)
Gene ID: k141_123403_21
Type: TC
Location: 25183 - 26055 (+)
Gene ID: k141_123403_22
Type: TC
Location: 26070 - 27731 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_123403_15 vegetarian > omnivore 1.08073 0.01190
k141_123403_19 vegetarian > omnivore 1.04764 0.01190

🧭 Explore Read Mapping of CGC

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