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Cluster: GH080_bin.45_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_433838 k141_433838_8 16074 17360 - 2.A.49.9.2
TF k141_433838 k141_433838_9 17462 18301 - HTH_AraC | HTH_AraC
STP k141_433838 k141_433838_10 18592 21894 + TPR_1
CAZyme k141_433838 k141_433838_11 21921 24767 + GH2
Gene ID: k141_433838_8
Type: TC
Location: 16074 - 17360 (-)
Gene ID: k141_433838_9
Type: TF
Location: 17462 - 18301 (-)
Gene ID: k141_433838_10
Type: STP
Location: 18592 - 21894 (+)
Gene ID: k141_433838_11
Type: CAZyme
Location: 21921 - 24767 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_433838_11 vegan > omnivore 1.07037 0.01053

🧭 Explore Read Mapping of CGC

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