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Cluster: GH080_bin.45_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_146017 k141_146017_1 274 1314 + GH43_17
pfam k141_146017 k141_146017_2 1422 3173 - SBP_bac_1 | SBP_bac_8
NULL(UNKNOWN) k141_146017 k141_146017_3 3112 3267 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_146017 k141_146017_4 3271 4149 - 3.A.1.1.29
TC k141_146017 k141_146017_5 4198 5130 - 3.A.1.1.29
TF k141_146017 k141_146017_6 5418 6587 - HTH_AraC | HTH_AraC
CAZyme k141_146017 k141_146017_7 6778 9918 - GH38
CAZyme k141_146017 k141_146017_8 9978 11978 - GH50
Gene ID: k141_146017_1
Type: CAZyme
Location: 274 - 1314 (+)
Gene ID: k141_146017_2
Type: pfam
Location: 1422 - 3173 (-)
Gene ID: k141_146017_3
Type:
Location: 3112 - 3267 (-)
Gene ID: k141_146017_4
Type: TC
Location: 3271 - 4149 (-)
Gene ID: k141_146017_5
Type: TC
Location: 4198 - 5130 (-)
Gene ID: k141_146017_6
Type: TF
Location: 5418 - 6587 (-)
Gene ID: k141_146017_7
Type: CAZyme
Location: 6778 - 9918 (-)
Gene ID: k141_146017_8
Type: CAZyme
Location: 9978 - 11978 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_146017_1 vegan > omnivore 1.15550 0.01053

🧭 Explore Read Mapping of CGC

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