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Cluster: GH080_bin.45_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_48147 k141_48147_22 22645 23523 + 2.A.115.1.5
TC k141_48147 k141_48147_23 23698 24804 + 3.A.1.1.26
pfam k141_48147 k141_48147_24 24950 26032 + HTH_30 | GGDEF_2
TC k141_48147 k141_48147_25 26172 27530 + 9.B.174.1.1
NULL(UNKNOWN) k141_48147 k141_48147_26 27679 29433 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase k141_48147 k141_48147_27 29452 30552 + M24.UPB
TC k141_48147 k141_48147_28 30929 31627 + 3.A.1.134.3
pfam k141_48147 k141_48147_29 31621 33897 + FtsX | FtsX
pfam k141_48147 k141_48147_30 33880 34773 - PseudoU_synth_2
TC k141_48147 k141_48147_31 34788 35729 - 2.A.7.3.52
CAZyme k141_48147 k141_48147_32 35865 37211 + GH43_35
Gene ID: k141_48147_22
Type: TC
Location: 22645 - 23523 (+)
Gene ID: k141_48147_23
Type: TC
Location: 23698 - 24804 (+)
Gene ID: k141_48147_24
Type: pfam
Location: 24950 - 26032 (+)
Gene ID: k141_48147_25
Type: TC
Location: 26172 - 27530 (+)
Gene ID: k141_48147_26
Type:
Location: 27679 - 29433 (+)
Gene ID: k141_48147_27
Type: peptidase
Location: 29452 - 30552 (+)
Gene ID: k141_48147_28
Type: TC
Location: 30929 - 31627 (+)
Gene ID: k141_48147_29
Type: pfam
Location: 31621 - 33897 (+)
Gene ID: k141_48147_30
Type: pfam
Location: 33880 - 34773 (-)
Gene ID: k141_48147_31
Type: TC
Location: 34788 - 35729 (-)
Gene ID: k141_48147_32
Type: CAZyme
Location: 35865 - 37211 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_48147_27 vegan > omnivore 1.08640 0.01053

🧭 Explore Read Mapping of CGC

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