dbCAN Logo

Cluster: GH080_bin.45_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_447020 k141_447020_7 6997 7947 + 3.A.1.1.45
TC k141_447020 k141_447020_8 7947 8807 + 3.A.1.1.45
CAZyme k141_447020 k141_447020_9 8923 10755 + GH13_4
TC k141_447020 k141_447020_10 10887 12407 - 2.A.118.1.8
peptidase k141_447020 k141_447020_11 12538 13683 - M38.UPW
TF k141_447020 k141_447020_12 13850 14857 + MarR
TC k141_447020 k141_447020_13 14915 16702 - 1.A.11.2.7
Gene ID: k141_447020_7
Type: TC
Location: 6997 - 7947 (+)
Gene ID: k141_447020_8
Type: TC
Location: 7947 - 8807 (+)
Gene ID: k141_447020_9
Type: CAZyme
Location: 8923 - 10755 (+)
Gene ID: k141_447020_10
Type: TC
Location: 10887 - 12407 (-)
Gene ID: k141_447020_11
Type: peptidase
Location: 12538 - 13683 (-)
Gene ID: k141_447020_12
Type: TF
Location: 13850 - 14857 (+)
Gene ID: k141_447020_13
Type: TC
Location: 14915 - 16702 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_447020_11 vegan > omnivore 1.13074 0.01053
k141_447020_12 vegan > omnivore 1.11039 0.01053

🧭 Explore Read Mapping of CGC

← Back to Cluster List