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Cluster: GH080_bin.45_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_365278 k141_365278_2 619 1260 - CE4
peptidase k141_365278 k141_365278_3 1497 2918 - S01.UPC
pfam k141_365278 k141_365278_4 3091 4392 - LytR_cpsA_psr
TC k141_365278 k141_365278_5 4443 5858 - 9.B.18.1.1
CAZyme k141_365278 k141_365278_6 6013 7002 - GT2
CAZyme k141_365278 k141_365278_7 7015 9174 - GT2 | GT2
CAZyme k141_365278 k141_365278_8 9208 11340 - GT2 | GT2
TC k141_365278 k141_365278_9 11379 12116 - 3.A.1.103.1
pfam k141_365278 k141_365278_10 12158 13186 - ABC2_membrane
pfam k141_365278 k141_365278_11 13216 13773 - dTDP_sugar_isom
CAZyme k141_365278 k141_365278_12 13810 14730 - GT2
NULL(UNKNOWN) k141_365278 k141_365278_13 14811 16157 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_365278 k141_365278_14 16180 16443 - 8.A.8.1.6
Gene ID: k141_365278_2
Type: CAZyme
Location: 619 - 1260 (-)
Gene ID: k141_365278_3
Type: peptidase
Location: 1497 - 2918 (-)
Gene ID: k141_365278_4
Type: pfam
Location: 3091 - 4392 (-)
Gene ID: k141_365278_5
Type: TC
Location: 4443 - 5858 (-)
Gene ID: k141_365278_6
Type: CAZyme
Location: 6013 - 7002 (-)
Gene ID: k141_365278_7
Type: CAZyme
Location: 7015 - 9174 (-)
Gene ID: k141_365278_8
Type: CAZyme
Location: 9208 - 11340 (-)
Gene ID: k141_365278_9
Type: TC
Location: 11379 - 12116 (-)
Gene ID: k141_365278_10
Type: pfam
Location: 12158 - 13186 (-)
Gene ID: k141_365278_11
Type: pfam
Location: 13216 - 13773 (-)
Gene ID: k141_365278_12
Type: CAZyme
Location: 13810 - 14730 (-)
Gene ID: k141_365278_13
Type:
Location: 14811 - 16157 (-)
Gene ID: k141_365278_14
Type: TC
Location: 16180 - 16443 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_365278_2 vegan > omnivore 1.21197 0.01053
k141_365278_2 vegetarian > omnivore 1.03276 0.01190
k141_365278_9 vegan > omnivore 1.19457 0.01053
k141_365278_13 vegetarian > omnivore 1.08698 0.01190

🧭 Explore Read Mapping of CGC

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