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Cluster: GH068_83_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_298317 k141_298317_10 6063 6905 - 1.B.42.1.2
TC k141_298317 k141_298317_11 7129 7875 + 3.A.1.27.1
TC k141_298317 k141_298317_12 7930 8712 + 3.A.1.27.5
TC k141_298317 k141_298317_13 8702 9931 + 3.A.11.1.3
CAZyme k141_298317 k141_298317_14 9933 12182 - GH92
STP k141_298317 k141_298317_15 12423 13160 - Response_reg
pfam k141_298317 k141_298317_16 13216 15252 - His_kinase | TPR_8 | TPR_8 | TPR_10
TC k141_298317 k141_298317_17 15337 17514 - 2.A.16.2.2
Gene ID: k141_298317_10
Type: TC
Location: 6063 - 6905 (-)
Gene ID: k141_298317_11
Type: TC
Location: 7129 - 7875 (+)
Gene ID: k141_298317_12
Type: TC
Location: 7930 - 8712 (+)
Gene ID: k141_298317_13
Type: TC
Location: 8702 - 9931 (+)
Gene ID: k141_298317_14
Type: CAZyme
Location: 9933 - 12182 (-)
Gene ID: k141_298317_15
Type: STP
Location: 12423 - 13160 (-)
Gene ID: k141_298317_16
Type: pfam
Location: 13216 - 15252 (-)
Gene ID: k141_298317_17
Type: TC
Location: 15337 - 17514 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_298317_10 vegetarian > vegan 1.49136 0.02118

🧭 Explore Read Mapping of CGC

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