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Cluster: GH068_83_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_338630 k141_338630_9 14613 17630 + 1.B.14.6.1
pfam k141_338630 k141_338630_10 17661 19328 + SusD_RagB | SusD-like_3
pfam k141_338630 k141_338630_11 19343 20530 + DUF4960
CAZyme k141_338630 k141_338630_12 20714 23182 + GH32
STP k141_338630 k141_338630_13 23530 24414 - PfkB
TC k141_338630 k141_338630_14 24718 25929 - 2.A.1.7.17
CAZyme k141_338630 k141_338630_15 25973 27733 - GH32
Gene ID: k141_338630_9
Type: TC
Location: 14613 - 17630 (+)
Gene ID: k141_338630_10
Type: pfam
Location: 17661 - 19328 (+)
Gene ID: k141_338630_11
Type: pfam
Location: 19343 - 20530 (+)
Gene ID: k141_338630_12
Type: CAZyme
Location: 20714 - 23182 (+)
Gene ID: k141_338630_13
Type: STP
Location: 23530 - 24414 (-)
Gene ID: k141_338630_14
Type: TC
Location: 24718 - 25929 (-)
Gene ID: k141_338630_15
Type: CAZyme
Location: 25973 - 27733 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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