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Cluster: GH062_bin.1_sub_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_96190 k141_96190_12 10343 12382 + 1.C.105.2.6
pfam k141_96190 k141_96190_13 12379 13656 + Cadherin-like
NULL(UNKNOWN) k141_96190 k141_96190_14 14154 14813 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_96190 k141_96190_15 15063 16109 + 9.B.146.1.1
pfam k141_96190 k141_96190_16 16106 17269 + GLF | NAD_binding_8
CAZyme k141_96190 k141_96190_17 17283 18308 + GT2
TC k141_96190 k141_96190_18 18308 19762 + 2.A.66.2.16
CAZyme k141_96190 k141_96190_19 19729 20700 + GT2
CAZyme k141_96190 k141_96190_20 20709 23084 + GT4
CAZyme k141_96190 k141_96190_21 23085 24158 + GT4
Gene ID: k141_96190_12
Type: TC
Location: 10343 - 12382 (+)
Gene ID: k141_96190_13
Type: pfam
Location: 12379 - 13656 (+)
Gene ID: k141_96190_14
Type:
Location: 14154 - 14813 (-)
Gene ID: k141_96190_15
Type: TC
Location: 15063 - 16109 (+)
Gene ID: k141_96190_16
Type: pfam
Location: 16106 - 17269 (+)
Gene ID: k141_96190_17
Type: CAZyme
Location: 17283 - 18308 (+)
Gene ID: k141_96190_18
Type: TC
Location: 18308 - 19762 (+)
Gene ID: k141_96190_19
Type: CAZyme
Location: 19729 - 20700 (+)
Gene ID: k141_96190_20
Type: CAZyme
Location: 20709 - 23084 (+)
Gene ID: k141_96190_21
Type: CAZyme
Location: 23085 - 24158 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
RUG12438
→
Species
RUG12438 sp934153675

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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