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Cluster: GH062_bin.1_sub_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_280615 k141_280615_60 53266 54234 - 3.A.5.1.1
NULL(UNKNOWN) k141_280615 k141_280615_61 54250 54438 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_280615 k141_280615_62 54519 54830 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_280615 k141_280615_63 54820 55491 - CE4
TC k141_280615 k141_280615_64 55537 57855 - 3.A.3.23.2
NULL(UNKNOWN) k141_280615 k141_280615_65 57900 58985 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_280615 k141_280615_66 59089 60192 - VanZ
CAZyme k141_280615 k141_280615_67 60227 61729 - CE4
Gene ID: k141_280615_60
Type: TC
Location: 53266 - 54234 (-)
Gene ID: k141_280615_61
Type:
Location: 54250 - 54438 (-)
Gene ID: k141_280615_62
Type:
Location: 54519 - 54830 (+)
Gene ID: k141_280615_63
Type: CAZyme
Location: 54820 - 55491 (-)
Gene ID: k141_280615_64
Type: TC
Location: 55537 - 57855 (-)
Gene ID: k141_280615_65
Type:
Location: 57900 - 58985 (-)
Gene ID: k141_280615_66
Type: pfam
Location: 59089 - 60192 (-)
Gene ID: k141_280615_67
Type: CAZyme
Location: 60227 - 61729 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
RF39
→
Family
UBA660
→
Genus
RUG12438
→
Species
RUG12438 sp934153675

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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