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Cluster: GH059_maxbin.010_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_564933 k141_564933_239 237336 239372 - GT5
pfam k141_564933 k141_564933_240 239524 240114 + GrpE
pfam k141_564933 k141_564933_241 240254 241378 + LptF_LptG
TC k141_564933 k141_564933_242 241368 243641 + 1.B.42.1.4
pfam k141_564933 k141_564933_243 243655 244854 + Rotamase | SurA_N | Rotamase_2 | Rotamase_3 | SurA_N_3
pfam k141_564933 k141_564933_244 244854 245684 + RrnaAD
TC k141_564933 k141_564933_245 245764 247686 + 2.A.37.1.5
NULL(UNKNOWN) k141_564933 k141_564933_246 248019 248894 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_564933 k141_564933_247 248896 250143 - SUFBD_core | SufBD_N
TC k141_564933 k141_564933_248 250144 250902 - 3.A.1.128.6
pfam k141_564933 k141_564933_249 250914 252356 - SUFBD_core | SufBD_N
STP k141_564933 k141_564933_250 252491 253489 + GGDEF | PAS
TC k141_564933 k141_564933_251 253489 254400 + 1.A.34.1.2
pfam k141_564933 k141_564933_252 254497 254862 + YajC
TC k141_564933 k141_564933_253 254875 256425 + 2.A.6.4.1
TC k141_564933 k141_564933_254 256445 257383 + 2.A.6.4.1
NULL(UNKNOWN) k141_564933 k141_564933_255 257708 258367 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_564933 k141_564933_256 258827 261295 - GT35
TC k141_564933 k141_564933_257 261476 262831 + 1.B.17.1.5
NULL(UNKNOWN) k141_564933 k141_564933_258 262907 263266 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_564933 k141_564933_259 263337 265976 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
TC k141_564933 k141_564933_260 265987 266625 + 9.B.186.1.1
Gene ID: k141_564933_239
Type: CAZyme
Location: 237336 - 239372 (-)
Gene ID: k141_564933_240
Type: pfam
Location: 239524 - 240114 (+)
Gene ID: k141_564933_241
Type: pfam
Location: 240254 - 241378 (+)
Gene ID: k141_564933_242
Type: TC
Location: 241368 - 243641 (+)
Gene ID: k141_564933_243
Type: pfam
Location: 243655 - 244854 (+)
Gene ID: k141_564933_244
Type: pfam
Location: 244854 - 245684 (+)
Gene ID: k141_564933_245
Type: TC
Location: 245764 - 247686 (+)
Gene ID: k141_564933_246
Type:
Location: 248019 - 248894 (+)
Gene ID: k141_564933_247
Type: pfam
Location: 248896 - 250143 (-)
Gene ID: k141_564933_248
Type: TC
Location: 250144 - 250902 (-)
Gene ID: k141_564933_249
Type: pfam
Location: 250914 - 252356 (-)
Gene ID: k141_564933_250
Type: STP
Location: 252491 - 253489 (+)
Gene ID: k141_564933_251
Type: TC
Location: 253489 - 254400 (+)
Gene ID: k141_564933_252
Type: pfam
Location: 254497 - 254862 (+)
Gene ID: k141_564933_253
Type: TC
Location: 254875 - 256425 (+)
Gene ID: k141_564933_254
Type: TC
Location: 256445 - 257383 (+)
Gene ID: k141_564933_255
Type:
Location: 257708 - 258367 (+)
Gene ID: k141_564933_256
Type: CAZyme
Location: 258827 - 261295 (-)
Gene ID: k141_564933_257
Type: TC
Location: 261476 - 262831 (+)
Gene ID: k141_564933_258
Type:
Location: 262907 - 263266 (+)
Gene ID: k141_564933_259
Type: pfam
Location: 263337 - 265976 (+)
Gene ID: k141_564933_260
Type: TC
Location: 265987 - 266625 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Alphaproteobacteria
→
Order
RF32
→
Family
CAG-239
→
Genus
RUG410
→
Species
RUG410 sp900769705

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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