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Cluster: GH058_bin.79_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_16419 k141_16419_21 24720 28655 + 9.B.18.1.1
pfam k141_16419 k141_16419_22 28642 29433 + PHP
TC k141_16419 k141_16419_23 29495 31267 - 2.A.58.2.2
STP k141_16419 k141_16419_24 31573 32313 + Peptidase_M23
CAZyme k141_16419 k141_16419_25 32369 34042 - GH25
CAZyme k141_16419 k141_16419_26 34272 35285 + CE4
TC k141_16419 k141_16419_27 35327 36610 - 3.A.1.11.7
TC k141_16419 k141_16419_28 36607 37416 - 3.A.1.11.8
TC k141_16419 k141_16419_29 37535 38344 - 3.A.1.11.8
TC k141_16419 k141_16419_30 38331 39419 - 3.A.1.11.7
pfam k141_16419 k141_16419_31 39836 40354 + Ribosomal_S30AE | Ribosom_S30AE_C
CAZyme k141_16419 k141_16419_32 40589 42982 + GH94
Gene ID: k141_16419_21
Type: TC
Location: 24720 - 28655 (+)
Gene ID: k141_16419_22
Type: pfam
Location: 28642 - 29433 (+)
Gene ID: k141_16419_23
Type: TC
Location: 29495 - 31267 (-)
Gene ID: k141_16419_24
Type: STP
Location: 31573 - 32313 (+)
Gene ID: k141_16419_25
Type: CAZyme
Location: 32369 - 34042 (-)
Gene ID: k141_16419_26
Type: CAZyme
Location: 34272 - 35285 (+)
Gene ID: k141_16419_27
Type: TC
Location: 35327 - 36610 (-)
Gene ID: k141_16419_28
Type: TC
Location: 36607 - 37416 (-)
Gene ID: k141_16419_29
Type: TC
Location: 37535 - 38344 (-)
Gene ID: k141_16419_30
Type: TC
Location: 38331 - 39419 (-)
Gene ID: k141_16419_31
Type: pfam
Location: 39836 - 40354 (+)
Gene ID: k141_16419_32
Type: CAZyme
Location: 40589 - 42982 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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