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Cluster: GH055_bin.57_sub_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_137972 k141_137972_2 3061 3981 - GT8
pfam k141_137972 k141_137972_3 4183 5196 + ABC_sub_bind
TC k141_137972 k141_137972_4 5244 6224 + 3.A.1.34.1
TC k141_137972 k141_137972_5 6225 7019 + 3.A.1.34.1
CAZyme k141_137972 k141_137972_6 7148 8098 + GH179
TC k141_137972 k141_137972_7 8125 9072 - 2.A.28.2.4
Gene ID: k141_137972_2
Type: CAZyme
Location: 3061 - 3981 (-)
Gene ID: k141_137972_3
Type: pfam
Location: 4183 - 5196 (+)
Gene ID: k141_137972_4
Type: TC
Location: 5244 - 6224 (+)
Gene ID: k141_137972_5
Type: TC
Location: 6225 - 7019 (+)
Gene ID: k141_137972_6
Type: CAZyme
Location: 7148 - 8098 (+)
Gene ID: k141_137972_7
Type: TC
Location: 8125 - 9072 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_137972_7 vegan > omnivore 2.95384 0.01818

🧭 Explore Read Mapping of CGC

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