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Cluster: GH055_bin.57_sub_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_229638 k141_229638_280 334827 336617 - 9.B.33.1.1
TF k141_229638 k141_229638_281 336654 338165 - HTH_AraC
CAZyme k141_229638 k141_229638_282 338502 340763 - GT35
CAZyme k141_229638 k141_229638_283 340861 342444 - GH77
Gene ID: k141_229638_280
Type: TC
Location: 334827 - 336617 (-)
Gene ID: k141_229638_281
Type: TF
Location: 336654 - 338165 (-)
Gene ID: k141_229638_282
Type: CAZyme
Location: 338502 - 340763 (-)
Gene ID: k141_229638_283
Type: CAZyme
Location: 340861 - 342444 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_229638_283 vegan > omnivore 1.01895 0.01818

🧭 Explore Read Mapping of CGC

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