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Cluster: GH055_bin.57_sub_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_227468 k141_227468_18 20912 22201 - 3.D.10.1.4
CAZyme k141_227468 k141_227468_19 22274 25030 - GH2
STP k141_227468 k141_227468_20 25218 26000 + MCPsignal
CAZyme k141_227468 k141_227468_21 26179 28581 - GH94
TC k141_227468 k141_227468_22 28971 30185 + 8.A.59.4.1
TC k141_227468 k141_227468_23 30543 31247 + 2.A.106.1.3
Gene ID: k141_227468_18
Type: TC
Location: 20912 - 22201 (-)
Gene ID: k141_227468_19
Type: CAZyme
Location: 22274 - 25030 (-)
Gene ID: k141_227468_20
Type: STP
Location: 25218 - 26000 (+)
Gene ID: k141_227468_21
Type: CAZyme
Location: 26179 - 28581 (-)
Gene ID: k141_227468_22
Type: TC
Location: 28971 - 30185 (+)
Gene ID: k141_227468_23
Type: TC
Location: 30543 - 31247 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_227468_18 vegan > omnivore 1.02293 0.01818

🧭 Explore Read Mapping of CGC

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