dbCAN Logo

Cluster: GH055_bin.57_sub_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_345695 k141_345695_9 5610 7820 + 2.A.53.1.4
TF k141_345695 k141_345695_10 7832 8551 + LytTR
pfam k141_345695 k141_345695_11 8575 9870 + HATPase_c | HATPase_c_5
CAZyme k141_345695 k141_345695_12 10293 11969 - CBM13 | GH5_4
CAZyme k141_345695 k141_345695_13 12470 13933 + GH32
Gene ID: k141_345695_9
Type: TC
Location: 5610 - 7820 (+)
Gene ID: k141_345695_10
Type: TF
Location: 7832 - 8551 (+)
Gene ID: k141_345695_11
Type: pfam
Location: 8575 - 9870 (+)
Gene ID: k141_345695_12
Type: CAZyme
Location: 10293 - 11969 (-)
Gene ID: k141_345695_13
Type: CAZyme
Location: 12470 - 13933 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_345695_12 vegan > omnivore 1.19209 0.01818

🧭 Explore Read Mapping of CGC

← Back to Cluster List