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Cluster: GH055_bin.57_sub_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_165554 k141_165554_138 165508 166275 - 3.A.15.2.1
pfam k141_165554 k141_165554_139 166304 166828 - N_methyl
TC k141_165554 k141_165554_140 166937 168205 - 3.A.15.1.1
TC k141_165554 k141_165554_141 168416 169474 - 3.A.15.2.1
TC k141_165554 k141_165554_142 169500 171236 - 3.A.11.1.3
pfam k141_165554 k141_165554_143 171436 171951 - DUF5721
NULL(UNKNOWN) k141_165554 k141_165554_144 172063 172257 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_165554 k141_165554_145 172313 174286 - GH13_11
Gene ID: k141_165554_138
Type: TC
Location: 165508 - 166275 (-)
Gene ID: k141_165554_139
Type: pfam
Location: 166304 - 166828 (-)
Gene ID: k141_165554_140
Type: TC
Location: 166937 - 168205 (-)
Gene ID: k141_165554_141
Type: TC
Location: 168416 - 169474 (-)
Gene ID: k141_165554_142
Type: TC
Location: 169500 - 171236 (-)
Gene ID: k141_165554_143
Type: pfam
Location: 171436 - 171951 (-)
Gene ID: k141_165554_144
Type:
Location: 172063 - 172257 (+)
Gene ID: k141_165554_145
Type: CAZyme
Location: 172313 - 174286 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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