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Cluster: GH055_bin.48_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_184432 k141_184432_35 40776 42275 - 9.B.18.1.2
pfam k141_184432 k141_184432_36 42314 42490 - DUF6472
TF k141_184432 k141_184432_37 42580 44154 - HTH_AraC | HTH_AraC
TC k141_184432 k141_184432_38 44406 44951 + 9.B.156.3.1
STP k141_184432 k141_184432_39 44926 45336 - Response_reg
CAZyme k141_184432 k141_184432_40 45625 47913 - GH5_4
Gene ID: k141_184432_35
Type: TC
Location: 40776 - 42275 (-)
Gene ID: k141_184432_36
Type: pfam
Location: 42314 - 42490 (-)
Gene ID: k141_184432_37
Type: TF
Location: 42580 - 44154 (-)
Gene ID: k141_184432_38
Type: TC
Location: 44406 - 44951 (+)
Gene ID: k141_184432_39
Type: STP
Location: 44926 - 45336 (-)
Gene ID: k141_184432_40
Type: CAZyme
Location: 45625 - 47913 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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