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Cluster: GH055_bin.48_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_290625 k141_290625_36 55271 56344 - GH5_2
pfam k141_290625 k141_290625_37 56486 57451 - Dus
STP k141_290625 k141_290625_38 58280 62203 + HATPase_c | HisKA | Reg_prop | Response_reg | Y_Y_Y
TC k141_290625 k141_290625_39 62200 64665 - 3.A.1.122.13
TC k141_290625 k141_290625_40 64662 67163 - 3.A.1.122.13
TC k141_290625 k141_290625_41 67244 67648 - 3.A.2.1.5
TC k141_290625 k141_290625_42 67675 69078 - 3.A.2.1.5
TC k141_290625 k141_290625_43 69105 69983 - 3.A.2.1.5
TC k141_290625 k141_290625_44 70091 71605 - 3.A.2.1.5
TC k141_290625 k141_290625_45 71630 72184 - 3.A.2.1.2
pfam k141_290625 k141_290625_46 72172 72729 - ATP-synt_B
TC k141_290625 k141_290625_47 72771 73034 - 3.A.2.1.2
TC k141_290625 k141_290625_48 73124 74023 - 3.A.2.1.5
Gene ID: k141_290625_36
Type: CAZyme
Location: 55271 - 56344 (-)
Gene ID: k141_290625_37
Type: pfam
Location: 56486 - 57451 (-)
Gene ID: k141_290625_38
Type: STP
Location: 58280 - 62203 (+)
Gene ID: k141_290625_39
Type: TC
Location: 62200 - 64665 (-)
Gene ID: k141_290625_40
Type: TC
Location: 64662 - 67163 (-)
Gene ID: k141_290625_41
Type: TC
Location: 67244 - 67648 (-)
Gene ID: k141_290625_42
Type: TC
Location: 67675 - 69078 (-)
Gene ID: k141_290625_43
Type: TC
Location: 69105 - 69983 (-)
Gene ID: k141_290625_44
Type: TC
Location: 70091 - 71605 (-)
Gene ID: k141_290625_45
Type: TC
Location: 71630 - 72184 (-)
Gene ID: k141_290625_46
Type: pfam
Location: 72172 - 72729 (-)
Gene ID: k141_290625_47
Type: TC
Location: 72771 - 73034 (-)
Gene ID: k141_290625_48
Type: TC
Location: 73124 - 74023 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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