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Cluster: GH055_bin.48_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_19936 k141_19936_8 5085 6410 + GH29
pfam k141_19936 k141_19936_9 6554 6820 + Ribosomal_S15
pfam k141_19936 k141_19936_10 7113 9200 + KH_1 | S1 | RNase_PH | RNase_PH | RNase_PH_C | RNase_PH_C | PNPase
TC k141_19936 k141_19936_11 9441 12143 + 8.A.59.4.1
TC k141_19936 k141_19936_12 12227 12718 + 2.A.87.3.2
peptidase k141_19936 k141_19936_13 12894 13541 + S14.UPW
pfam k141_19936 k141_19936_14 13682 14557 + BacA
TC k141_19936 k141_19936_15 14623 17697 + 3.A.12.1.1
Gene ID: k141_19936_8
Type: CAZyme
Location: 5085 - 6410 (+)
Gene ID: k141_19936_9
Type: pfam
Location: 6554 - 6820 (+)
Gene ID: k141_19936_10
Type: pfam
Location: 7113 - 9200 (+)
Gene ID: k141_19936_11
Type: TC
Location: 9441 - 12143 (+)
Gene ID: k141_19936_12
Type: TC
Location: 12227 - 12718 (+)
Gene ID: k141_19936_13
Type: peptidase
Location: 12894 - 13541 (+)
Gene ID: k141_19936_14
Type: pfam
Location: 13682 - 14557 (+)
Gene ID: k141_19936_15
Type: TC
Location: 14623 - 17697 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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