dbCAN Logo

Cluster: GH055_bin.48_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_301343 k141_301343_9 8525 11485 + GH5_4
pfam k141_301343 k141_301343_10 11692 12708 - ABC_sub_bind
TC k141_301343 k141_301343_11 13006 14367 + 2.A.66.1.23
CAZyme k141_301343 k141_301343_12 14410 17568 + GH3
pfam k141_301343 k141_301343_13 17747 18118 + bPH_2
TC k141_301343 k141_301343_14 18267 20903 + 4.A.2.1.17
NULL(UNKNOWN) k141_301343 k141_301343_15 21129 21410 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_301343 k141_301343_16 21758 21985 - PTS-HPr
CAZyme k141_301343 k141_301343_17 22004 23653 - CBM91 | GH43_11
TC k141_301343 k141_301343_18 23666 25051 - 2.A.2.3.3
Gene ID: k141_301343_9
Type: CAZyme
Location: 8525 - 11485 (+)
Gene ID: k141_301343_10
Type: pfam
Location: 11692 - 12708 (-)
Gene ID: k141_301343_11
Type: TC
Location: 13006 - 14367 (+)
Gene ID: k141_301343_12
Type: CAZyme
Location: 14410 - 17568 (+)
Gene ID: k141_301343_13
Type: pfam
Location: 17747 - 18118 (+)
Gene ID: k141_301343_14
Type: TC
Location: 18267 - 20903 (+)
Gene ID: k141_301343_15
Type:
Location: 21129 - 21410 (+)
Gene ID: k141_301343_16
Type: STP
Location: 21758 - 21985 (-)
Gene ID: k141_301343_17
Type: CAZyme
Location: 22004 - 23653 (-)
Gene ID: k141_301343_18
Type: TC
Location: 23666 - 25051 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List