Cluster: GH041_bin.72_CGC9
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: GH041_bin.72
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_18660 | k141_18660_31 | 35054 | 35821 | - | 1.A.23.4.10 |
| pfam | k141_18660 | k141_18660_32 | 35951 | 37972 | - | Metallophos | 5_nucleotid_C |
| TC | k141_18660 | k141_18660_33 | 38046 | 38840 | - | 3.A.1.34.1 |
| TC | k141_18660 | k141_18660_34 | 38833 | 39756 | - | 3.A.1.34.1 |
| TC | k141_18660 | k141_18660_35 | 39961 | 40941 | - | 3.A.1.34.1 |
| NULL(UNKNOWN) | k141_18660 | k141_18660_36 | 41101 | 41889 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_18660 | k141_18660_37 | 42141 | 43544 | - | tRNA-synt_2 | tRNA_anti-codon |
| TC | k141_18660 | k141_18660_38 | 43726 | 44289 | - | 4.A.1.2.6 |
| peptidase | k141_18660 | k141_18660_39 | 44535 | 45437 | + | S09.UPW |
| TC | k141_18660 | k141_18660_40 | 45624 | 47984 | + | 9.A.8.1.6 |
| TC | k141_18660 | k141_18660_41 | 48108 | 49304 | + | 2.A.1.2.18 |
| CAZyme | k141_18660 | k141_18660_42 | 49458 | 50834 | + | GH13_20 |
Gene ID: k141_18660_31
Type: TC
Location: 35054 - 35821 (-)
Type: TC
Location: 35054 - 35821 (-)
Gene ID: k141_18660_32
Type: pfam
Location: 35951 - 37972 (-)
Type: pfam
Location: 35951 - 37972 (-)
Gene ID: k141_18660_33
Type: TC
Location: 38046 - 38840 (-)
Type: TC
Location: 38046 - 38840 (-)
Gene ID: k141_18660_34
Type: TC
Location: 38833 - 39756 (-)
Type: TC
Location: 38833 - 39756 (-)
Gene ID: k141_18660_35
Type: TC
Location: 39961 - 40941 (-)
Type: TC
Location: 39961 - 40941 (-)
Gene ID: k141_18660_36
Type:
Location: 41101 - 41889 (-)
Type:
Location: 41101 - 41889 (-)
Gene ID: k141_18660_37
Type: pfam
Location: 42141 - 43544 (-)
Type: pfam
Location: 42141 - 43544 (-)
Gene ID: k141_18660_38
Type: TC
Location: 43726 - 44289 (-)
Type: TC
Location: 43726 - 44289 (-)
Gene ID: k141_18660_39
Type: peptidase
Location: 44535 - 45437 (+)
Type: peptidase
Location: 44535 - 45437 (+)
Gene ID: k141_18660_40
Type: TC
Location: 45624 - 47984 (+)
Type: TC
Location: 45624 - 47984 (+)
Gene ID: k141_18660_41
Type: TC
Location: 48108 - 49304 (+)
Type: TC
Location: 48108 - 49304 (+)
Gene ID: k141_18660_42
Type: CAZyme
Location: 49458 - 50834 (+)
Type: CAZyme
Location: 49458 - 50834 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_18660_32 | vegan > omnivore | 2.18670 | 0.01033 |
| k141_18660_32 | vegetarian > omnivore | 1.60833 | 0.00699 |