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Cluster: GH041_bin.72_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_348979 k141_348979_3 2891 4396 + GH77
CAZyme k141_348979 k141_348979_4 4525 6792 + GT35
TC k141_348979 k141_348979_5 7249 8448 - 3.A.1.1.22
TC k141_348979 k141_348979_6 8517 9356 - 3.A.1.1.45
TC k141_348979 k141_348979_7 9356 10210 - 3.A.1.1.45
TC k141_348979 k141_348979_8 10298 11614 - 3.A.1.1.45
TF k141_348979 k141_348979_9 11921 12640 - GntR
NULL(UNKNOWN) k141_348979 k141_348979_10 12724 12843 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_348979 k141_348979_11 12865 15315 + 4.A.1.1.8
pfam k141_348979 k141_348979_12 15443 16456 + polyprenyl_synt
pfam k141_348979 k141_348979_13 16596 17501 + PG_binding_1 | PG_binding_1
TC k141_348979 k141_348979_14 18861 20750 + 2.A.114.1.3
Gene ID: k141_348979_3
Type: CAZyme
Location: 2891 - 4396 (+)
Gene ID: k141_348979_4
Type: CAZyme
Location: 4525 - 6792 (+)
Gene ID: k141_348979_5
Type: TC
Location: 7249 - 8448 (-)
Gene ID: k141_348979_6
Type: TC
Location: 8517 - 9356 (-)
Gene ID: k141_348979_7
Type: TC
Location: 9356 - 10210 (-)
Gene ID: k141_348979_8
Type: TC
Location: 10298 - 11614 (-)
Gene ID: k141_348979_9
Type: TF
Location: 11921 - 12640 (-)
Gene ID: k141_348979_10
Type:
Location: 12724 - 12843 (-)
Gene ID: k141_348979_11
Type: TC
Location: 12865 - 15315 (+)
Gene ID: k141_348979_12
Type: pfam
Location: 15443 - 16456 (+)
Gene ID: k141_348979_13
Type: pfam
Location: 16596 - 17501 (+)
Gene ID: k141_348979_14
Type: TC
Location: 18861 - 20750 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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