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Cluster: GH039_bin.17_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_48024 k141_48024_15 22027 24159 + PL8
TF k141_48024 k141_48024_16 24096 28142 - HTH_AraC
TC k141_48024 k141_48024_17 28383 31652 + 1.B.14.6.1
pfam k141_48024 k141_48024_18 31680 33680 + SusD_RagB | SusD-like_3
CAZyme k141_48024 k141_48024_19 33715 35742 + PL35
NULL(UNKNOWN) k141_48024 k141_48024_20 35798 36253 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_48024 k141_48024_21 36327 38477 + Mfa_like_1
CAZyme k141_48024 k141_48024_22 38790 40019 + GH88
Gene ID: k141_48024_15
Type: CAZyme
Location: 22027 - 24159 (+)
Gene ID: k141_48024_16
Type: TF
Location: 24096 - 28142 (-)
Gene ID: k141_48024_17
Type: TC
Location: 28383 - 31652 (+)
Gene ID: k141_48024_18
Type: pfam
Location: 31680 - 33680 (+)
Gene ID: k141_48024_19
Type: CAZyme
Location: 33715 - 35742 (+)
Gene ID: k141_48024_20
Type:
Location: 35798 - 36253 (+)
Gene ID: k141_48024_21
Type: pfam
Location: 36327 - 38477 (+)
Gene ID: k141_48024_22
Type: CAZyme
Location: 38790 - 40019 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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