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Cluster: GH039_bin.17_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_50803 k141_50803_9 10270 11763 - GH173
TF k141_50803 k141_50803_10 11766 12611 - HTH_AraC | HTH_AraC
CAZyme k141_50803 k141_50803_11 12614 16027 - CE1 | GH2
TC k141_50803 k141_50803_12 16188 17762 + 2.A.21.3.19
CAZyme k141_50803 k141_50803_13 17773 18828 + GH130_5
TC k141_50803 k141_50803_14 18862 21948 + 1.B.14.6.1
pfam k141_50803 k141_50803_15 21963 23492 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) k141_50803 k141_50803_16 23498 25105 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_50803 k141_50803_17 25157 26320 + GH26
Gene ID: k141_50803_9
Type: CAZyme
Location: 10270 - 11763 (-)
Gene ID: k141_50803_10
Type: TF
Location: 11766 - 12611 (-)
Gene ID: k141_50803_11
Type: CAZyme
Location: 12614 - 16027 (-)
Gene ID: k141_50803_12
Type: TC
Location: 16188 - 17762 (+)
Gene ID: k141_50803_13
Type: CAZyme
Location: 17773 - 18828 (+)
Gene ID: k141_50803_14
Type: TC
Location: 18862 - 21948 (+)
Gene ID: k141_50803_15
Type: pfam
Location: 21963 - 23492 (+)
Gene ID: k141_50803_16
Type:
Location: 23498 - 25105 (+)
Gene ID: k141_50803_17
Type: CAZyme
Location: 25157 - 26320 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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