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Cluster: GH039_bin.17_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42688 k141_42688_10 7929 8495 + 9.B.171.1.2
NULL(UNKNOWN) k141_42688 k141_42688_11 8545 10782 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_42688 k141_42688_12 10766 12037 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_42688 k141_42688_13 12062 13828 + GH78
pfam k141_42688 k141_42688_14 13849 14769 - Exo_endo_phos
pfam k141_42688 k141_42688_15 14900 15946 + ADH_zinc_N | ADH_N
TC k141_42688 k141_42688_16 16006 17607 + 2.A.21.3.10
TF k141_42688 k141_42688_17 17833 20682 + LacI
CAZyme k141_42688 k141_42688_18 20688 22817 + GH3
NULL(UNKNOWN) k141_42688 k141_42688_19 22823 24676 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_42688 k141_42688_20 24689 27742 + 1.B.14.6.1
Gene ID: k141_42688_10
Type: TC
Location: 7929 - 8495 (+)
Gene ID: k141_42688_11
Type:
Location: 8545 - 10782 (+)
Gene ID: k141_42688_12
Type:
Location: 10766 - 12037 (+)
Gene ID: k141_42688_13
Type: CAZyme
Location: 12062 - 13828 (+)
Gene ID: k141_42688_14
Type: pfam
Location: 13849 - 14769 (-)
Gene ID: k141_42688_15
Type: pfam
Location: 14900 - 15946 (+)
Gene ID: k141_42688_16
Type: TC
Location: 16006 - 17607 (+)
Gene ID: k141_42688_17
Type: TF
Location: 17833 - 20682 (+)
Gene ID: k141_42688_18
Type: CAZyme
Location: 20688 - 22817 (+)
Gene ID: k141_42688_19
Type:
Location: 22823 - 24676 (+)
Gene ID: k141_42688_20
Type: TC
Location: 24689 - 27742 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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