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Cluster: GH039_bin.17_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_283414 k141_283414_30 32949 33941 + 2.A.19.5.2
STP k141_283414 k141_283414_31 34025 34627 - Sigma70_r4_2
STP k141_283414 k141_283414_32 34757 35701 + FecR
TC k141_283414 k141_283414_33 35957 39286 + 1.B.14.6.13
TC k141_283414 k141_283414_34 39301 40872 + 8.A.46.2.2
pfam k141_283414 k141_283414_35 40884 41735 + GH18_BT1044-like
pfam k141_283414 k141_283414_36 41794 43113 + BT_3987-like_N | Laminin_G_3
CAZyme k141_283414 k141_283414_37 43126 44718 + GH18
CAZyme k141_283414 k141_283414_38 44788 45810 + GH18
Gene ID: k141_283414_30
Type: TC
Location: 32949 - 33941 (+)
Gene ID: k141_283414_31
Type: STP
Location: 34025 - 34627 (-)
Gene ID: k141_283414_32
Type: STP
Location: 34757 - 35701 (+)
Gene ID: k141_283414_33
Type: TC
Location: 35957 - 39286 (+)
Gene ID: k141_283414_34
Type: TC
Location: 39301 - 40872 (+)
Gene ID: k141_283414_35
Type: pfam
Location: 40884 - 41735 (+)
Gene ID: k141_283414_36
Type: pfam
Location: 41794 - 43113 (+)
Gene ID: k141_283414_37
Type: CAZyme
Location: 43126 - 44718 (+)
Gene ID: k141_283414_38
Type: CAZyme
Location: 44788 - 45810 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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