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Cluster: GH039_bin.17_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_15641 k141_15641_5 8029 9273 - GH16_7
CAZyme k141_15641 k141_15641_6 9299 11509 - GH92
CAZyme k141_15641 k141_15641_7 11506 13680 - GH92
NULL(UNKNOWN) k141_15641 k141_15641_8 13684 15054 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_15641 k141_15641_9 15073 16776 - SusD_RagB | SusD-like_3
TC k141_15641 k141_15641_10 16789 19578 - 1.B.14.6.1
pfam k141_15641 k141_15641_11 19597 21336 - SusD_RagB | SusD-like_3
TC k141_15641 k141_15641_12 21350 24451 - 1.B.14.6.1
NULL(UNKNOWN) k141_15641 k141_15641_13 24647 27196 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_15641 k141_15641_14 27226 29547 - GH3
Gene ID: k141_15641_5
Type: CAZyme
Location: 8029 - 9273 (-)
Gene ID: k141_15641_6
Type: CAZyme
Location: 9299 - 11509 (-)
Gene ID: k141_15641_7
Type: CAZyme
Location: 11506 - 13680 (-)
Gene ID: k141_15641_8
Type:
Location: 13684 - 15054 (-)
Gene ID: k141_15641_9
Type: pfam
Location: 15073 - 16776 (-)
Gene ID: k141_15641_10
Type: TC
Location: 16789 - 19578 (-)
Gene ID: k141_15641_11
Type: pfam
Location: 19597 - 21336 (-)
Gene ID: k141_15641_12
Type: TC
Location: 21350 - 24451 (-)
Gene ID: k141_15641_13
Type:
Location: 24647 - 27196 (-)
Gene ID: k141_15641_14
Type: CAZyme
Location: 27226 - 29547 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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