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Cluster: GH039_69_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_102865 k141_102865_6 6908 8206 - 2.A.26.1.5
TF k141_102865 k141_102865_7 8477 9334 + HTH_1
TC k141_102865 k141_102865_8 9746 10654 - 1.A.35.3.2
STP k141_102865 k141_102865_9 10808 11332 + Sigma70_r2 | Sigma70_r4_2
NULL(UNKNOWN) k141_102865 k141_102865_10 11322 12047 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_102865 k141_102865_11 12032 12919 + 3.A.1.148.3
NULL(UNKNOWN) k141_102865 k141_102865_12 12900 14108 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_102865 k141_102865_13 14256 14510 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_102865 k141_102865_14 14652 17042 - GH3
Gene ID: k141_102865_6
Type: TC
Location: 6908 - 8206 (-)
Gene ID: k141_102865_7
Type: TF
Location: 8477 - 9334 (+)
Gene ID: k141_102865_8
Type: TC
Location: 9746 - 10654 (-)
Gene ID: k141_102865_9
Type: STP
Location: 10808 - 11332 (+)
Gene ID: k141_102865_10
Type:
Location: 11322 - 12047 (+)
Gene ID: k141_102865_11
Type: TC
Location: 12032 - 12919 (+)
Gene ID: k141_102865_12
Type:
Location: 12900 - 14108 (+)
Gene ID: k141_102865_13
Type:
Location: 14256 - 14510 (-)
Gene ID: k141_102865_14
Type: CAZyme
Location: 14652 - 17042 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_102865_7 vegetarian > vegan 1.33644 0.01867

🧭 Explore Read Mapping of CGC

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