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Cluster: GH039_69_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_57758 k141_57758_7 9212 10009 - CE4
pfam k141_57758 k141_57758_8 10082 10801 - DUF218
TC k141_57758 k141_57758_9 10794 12671 - 3.A.1.121.4
pfam k141_57758 k141_57758_10 12687 13976 - Transpeptidase
TC k141_57758 k141_57758_11 13973 15694 - 2.A.103.1.6
pfam k141_57758 k141_57758_12 15790 16149 + NusG_II
TC k141_57758 k141_57758_13 16142 16642 + 2.A.87.3.1
TC k141_57758 k141_57758_14 16690 17520 + 3.A.1.132.3
Gene ID: k141_57758_7
Type: CAZyme
Location: 9212 - 10009 (-)
Gene ID: k141_57758_8
Type: pfam
Location: 10082 - 10801 (-)
Gene ID: k141_57758_9
Type: TC
Location: 10794 - 12671 (-)
Gene ID: k141_57758_10
Type: pfam
Location: 12687 - 13976 (-)
Gene ID: k141_57758_11
Type: TC
Location: 13973 - 15694 (-)
Gene ID: k141_57758_12
Type: pfam
Location: 15790 - 16149 (+)
Gene ID: k141_57758_13
Type: TC
Location: 16142 - 16642 (+)
Gene ID: k141_57758_14
Type: TC
Location: 16690 - 17520 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_57758_11 vegetarian > vegan 2.60329 0.01867
k141_57758_12 vegetarian > vegan 2.36493 0.01867
k141_57758_13 vegetarian > vegan 1.25183 0.01867

🧭 Explore Read Mapping of CGC

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