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Cluster: GH038_bin.44_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_64978 k141_64978_3 1129 1965 + CE1
CAZyme k141_64978 k141_64978_4 2225 3727 + GH51_1
pfam k141_64978 k141_64978_5 3818 4090 + DUF6171
CAZyme k141_64978 k141_64978_6 4087 6015 + GH127
TF k141_64978 k141_64978_7 6089 7012 - MarR
CAZyme k141_64978 k141_64978_8 7241 8197 + GH43_26
CAZyme k141_64978 k141_64978_9 8250 9842 + GH43_4
TF k141_64978 k141_64978_10 9896 10819 - HTH_5
STP k141_64978 k141_64978_11 11215 12609 + SBP_bac_1
TC k141_64978 k141_64978_12 12887 13786 + 3.A.1.1.34
TC k141_64978 k141_64978_13 13788 14660 + 3.A.1.1.34
CAZyme k141_64978 k141_64978_14 14691 16214 + GH51_1
TF k141_64978 k141_64978_15 16321 17139 - HTH_6
sulfatase k141_64978 k141_64978_16 17506 18249 + S1_9
CAZyme k141_64978 k141_64978_17 18309 19412 + CE9
Gene ID: k141_64978_3
Type: CAZyme
Location: 1129 - 1965 (+)
Gene ID: k141_64978_4
Type: CAZyme
Location: 2225 - 3727 (+)
Gene ID: k141_64978_5
Type: pfam
Location: 3818 - 4090 (+)
Gene ID: k141_64978_6
Type: CAZyme
Location: 4087 - 6015 (+)
Gene ID: k141_64978_7
Type: TF
Location: 6089 - 7012 (-)
Gene ID: k141_64978_8
Type: CAZyme
Location: 7241 - 8197 (+)
Gene ID: k141_64978_9
Type: CAZyme
Location: 8250 - 9842 (+)
Gene ID: k141_64978_10
Type: TF
Location: 9896 - 10819 (-)
Gene ID: k141_64978_11
Type: STP
Location: 11215 - 12609 (+)
Gene ID: k141_64978_12
Type: TC
Location: 12887 - 13786 (+)
Gene ID: k141_64978_13
Type: TC
Location: 13788 - 14660 (+)
Gene ID: k141_64978_14
Type: CAZyme
Location: 14691 - 16214 (+)
Gene ID: k141_64978_15
Type: TF
Location: 16321 - 17139 (-)
Gene ID: k141_64978_16
Type: sulfatase
Location: 17506 - 18249 (+)
Gene ID: k141_64978_17
Type: CAZyme
Location: 18309 - 19412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_64978_9 vegan > omnivore 1.37585 0.00406
k141_64978_10 vegan > omnivore 1.04133 0.00406
k141_64978_11 vegan > omnivore 1.07333 0.00406
k141_64978_12 vegan > omnivore 1.19413 0.00406
k141_64978_13 vegan > omnivore 1.10178 0.00406
k141_64978_14 vegan > omnivore 1.34983 0.00406
k141_64978_14 vegetarian > omnivore 1.11619 0.04425
k141_64978_17 vegan > omnivore 1.28174 0.00406

🧭 Explore Read Mapping of CGC

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