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Cluster: GH038_bin.44_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_209572 k141_209572_13 14483 15496 - 3.A.1.2.1
TC k141_209572 k141_209572_14 15496 16992 - 3.A.1.2.20
pfam k141_209572 k141_209572_15 17133 18194 - Peripla_BP_4
TC k141_209572 k141_209572_16 18300 19667 - 2.A.66.1.28
CAZyme k141_209572 k141_209572_17 19977 21161 - GH179
pfam k141_209572 k141_209572_18 21192 22109 - AP_endonuc_2
CAZyme k141_209572 k141_209572_19 22126 23178 - GH109
CAZyme k141_209572 k141_209572_20 23207 24382 - GH179
TC k141_209572 k141_209572_21 24486 25448 - 3.A.1.2.15
TC k141_209572 k141_209572_22 25429 26931 - 3.A.1.2.20
Gene ID: k141_209572_13
Type: TC
Location: 14483 - 15496 (-)
Gene ID: k141_209572_14
Type: TC
Location: 15496 - 16992 (-)
Gene ID: k141_209572_15
Type: pfam
Location: 17133 - 18194 (-)
Gene ID: k141_209572_16
Type: TC
Location: 18300 - 19667 (-)
Gene ID: k141_209572_17
Type: CAZyme
Location: 19977 - 21161 (-)
Gene ID: k141_209572_18
Type: pfam
Location: 21192 - 22109 (-)
Gene ID: k141_209572_19
Type: CAZyme
Location: 22126 - 23178 (-)
Gene ID: k141_209572_20
Type: CAZyme
Location: 23207 - 24382 (-)
Gene ID: k141_209572_21
Type: TC
Location: 24486 - 25448 (-)
Gene ID: k141_209572_22
Type: TC
Location: 25429 - 26931 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_209572_14 vegan > omnivore 1.55043 0.00406
k141_209572_16 vegan > omnivore 1.06604 0.00406
k141_209572_19 vegan > omnivore 1.06636 0.00406
k141_209572_21 vegan > omnivore 1.61820 0.00406
k141_209572_22 vegan > omnivore 1.80741 0.00229

🧭 Explore Read Mapping of CGC

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