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Cluster: GH031_bin.73_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_450337 k141_450337_23 23382 23939 + 3.A.1.25.5
CAZyme k141_450337 k141_450337_24 24023 25549 - GH3
CAZyme k141_450337 k141_450337_25 25546 26700 - GH171
CAZyme k141_450337 k141_450337_26 26702 27409 - CE14
pfam k141_450337 k141_450337_27 27415 28380 - Acetyltransf_1
TC k141_450337 k141_450337_28 28533 29402 - 3.A.1.1.36
TC k141_450337 k141_450337_29 29415 30338 - 3.A.1.1.28
Gene ID: k141_450337_23
Type: TC
Location: 23382 - 23939 (+)
Gene ID: k141_450337_24
Type: CAZyme
Location: 24023 - 25549 (-)
Gene ID: k141_450337_25
Type: CAZyme
Location: 25546 - 26700 (-)
Gene ID: k141_450337_26
Type: CAZyme
Location: 26702 - 27409 (-)
Gene ID: k141_450337_27
Type: pfam
Location: 27415 - 28380 (-)
Gene ID: k141_450337_28
Type: TC
Location: 28533 - 29402 (-)
Gene ID: k141_450337_29
Type: TC
Location: 29415 - 30338 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_450337_26 vegetarian > vegan 2.00729 0.01033

🧭 Explore Read Mapping of CGC

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