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Cluster: GH030_bin.25_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_380491 k141_380491_56 53526 55478 - PL33_1
TF k141_380491 k141_380491_57 55530 57128 - HTH_AraC | HTH_AraC
TC k141_380491 k141_380491_58 57162 58937 - 8.A.59.2.1
STP k141_380491 k141_380491_59 59277 60635 + SBP_bac_1
TC k141_380491 k141_380491_60 60771 61670 + 3.A.1.1.20
pfam k141_380491 k141_380491_61 61670 62461 + DUF7402
TC k141_380491 k141_380491_62 62475 63314 + 3.A.1.1.11
CAZyme k141_380491 k141_380491_63 63530 64702 + GH88
CAZyme k141_380491 k141_380491_64 64839 66578 + GH154
Gene ID: k141_380491_56
Type: CAZyme
Location: 53526 - 55478 (-)
Gene ID: k141_380491_57
Type: TF
Location: 55530 - 57128 (-)
Gene ID: k141_380491_58
Type: TC
Location: 57162 - 58937 (-)
Gene ID: k141_380491_59
Type: STP
Location: 59277 - 60635 (+)
Gene ID: k141_380491_60
Type: TC
Location: 60771 - 61670 (+)
Gene ID: k141_380491_61
Type: pfam
Location: 61670 - 62461 (+)
Gene ID: k141_380491_62
Type: TC
Location: 62475 - 63314 (+)
Gene ID: k141_380491_63
Type: CAZyme
Location: 63530 - 64702 (+)
Gene ID: k141_380491_64
Type: CAZyme
Location: 64839 - 66578 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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