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Cluster: GH030_bin.25_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_374210 k141_374210_3 3504 6128 + 8.A.7.1.5
TF k141_374210 k141_374210_4 6224 7042 - HTH_AraC | HTH_AraC
CAZyme k141_374210 k141_374210_5 7178 10081 + GH2
pfam k141_374210 k141_374210_6 10121 13570 + TPR_8 | TPR_16 | DUF5107
CAZyme k141_374210 k141_374210_7 13725 15749 + GH35
TC k141_374210 k141_374210_8 15800 17134 + 2.A.66.1.33
TF k141_374210 k141_374210_9 17152 18150 - HTH_AraC | HTH_AraC
TC k141_374210 k141_374210_10 18599 19552 + 3.A.1.1.29
TC k141_374210 k141_374210_11 19565 20494 + 3.A.1.1.29
NULL(UNKNOWN) k141_374210 k141_374210_12 20633 22354 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_374210 k141_374210_13 22567 23619 + GH105
CAZyme k141_374210 k141_374210_14 23620 25032 + CE12
CAZyme k141_374210 k141_374210_15 25127 27277 + GH112
CAZyme k141_374210 k141_374210_16 27462 28772 + GH28
CAZyme k141_374210 k141_374210_17 28917 30425 + GH51_1
pfam k141_374210 k141_374210_18 30433 30696 + DUF6171
TC k141_374210 k141_374210_19 30866 31945 + 2.A.56.1.1
pfam k141_374210 k141_374210_20 32135 32659 + DctQ
TC k141_374210 k141_374210_21 32659 33951 + 2.A.56.1.5
pfam k141_374210 k141_374210_22 34105 34584 + YcxB
TC k141_374210 k141_374210_23 34686 36167 + 8.A.59.2.1
TF k141_374210 k141_374210_24 36186 36956 + HTH_AraC | HTH_AraC
TC k141_374210 k141_374210_25 36953 37957 + 2.A.56.1.9
TC k141_374210 k141_374210_26 37979 39175 + 2.A.1.15.18
Gene ID: k141_374210_3
Type: TC
Location: 3504 - 6128 (+)
Gene ID: k141_374210_4
Type: TF
Location: 6224 - 7042 (-)
Gene ID: k141_374210_5
Type: CAZyme
Location: 7178 - 10081 (+)
Gene ID: k141_374210_6
Type: pfam
Location: 10121 - 13570 (+)
Gene ID: k141_374210_7
Type: CAZyme
Location: 13725 - 15749 (+)
Gene ID: k141_374210_8
Type: TC
Location: 15800 - 17134 (+)
Gene ID: k141_374210_9
Type: TF
Location: 17152 - 18150 (-)
Gene ID: k141_374210_10
Type: TC
Location: 18599 - 19552 (+)
Gene ID: k141_374210_11
Type: TC
Location: 19565 - 20494 (+)
Gene ID: k141_374210_12
Type:
Location: 20633 - 22354 (+)
Gene ID: k141_374210_13
Type: CAZyme
Location: 22567 - 23619 (+)
Gene ID: k141_374210_14
Type: CAZyme
Location: 23620 - 25032 (+)
Gene ID: k141_374210_15
Type: CAZyme
Location: 25127 - 27277 (+)
Gene ID: k141_374210_16
Type: CAZyme
Location: 27462 - 28772 (+)
Gene ID: k141_374210_17
Type: CAZyme
Location: 28917 - 30425 (+)
Gene ID: k141_374210_18
Type: pfam
Location: 30433 - 30696 (+)
Gene ID: k141_374210_19
Type: TC
Location: 30866 - 31945 (+)
Gene ID: k141_374210_20
Type: pfam
Location: 32135 - 32659 (+)
Gene ID: k141_374210_21
Type: TC
Location: 32659 - 33951 (+)
Gene ID: k141_374210_22
Type: pfam
Location: 34105 - 34584 (+)
Gene ID: k141_374210_23
Type: TC
Location: 34686 - 36167 (+)
Gene ID: k141_374210_24
Type: TF
Location: 36186 - 36956 (+)
Gene ID: k141_374210_25
Type: TC
Location: 36953 - 37957 (+)
Gene ID: k141_374210_26
Type: TC
Location: 37979 - 39175 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_374210_8 vegan > omnivore 1.24582 0.04977
k141_374210_18 vegetarian > omnivore 1.40178 0.01287

🧭 Explore Read Mapping of CGC

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