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Cluster: GH030_bin.25_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_239373 k141_239373_19 22422 24551 - GH3
TF k141_239373 k141_239373_20 24742 25635 + HTH_AraC | HTH_AraC
CAZyme k141_239373 k141_239373_21 25725 27176 + GH43_35
pfam k141_239373 k141_239373_22 27351 27674 + Trns_repr_metal
TC k141_239373 k141_239373_23 27795 30722 + 3.A.3.5.15
NULL(UNKNOWN) k141_239373 k141_239373_24 30755 31006 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_239373 k141_239373_25 31389 33989 + 3.A.9.1.2
pfam k141_239373 k141_239373_26 34270 34443 + DUF4250
pfam k141_239373 k141_239373_27 34436 35671 + RACo_C_ter | RACo_C_ter | Raco_middle
TC k141_239373 k141_239373_28 35838 38051 + 1.B.52.2.2
CAZyme k141_239373 k141_239373_29 38191 38895 + CE4
Gene ID: k141_239373_19
Type: CAZyme
Location: 22422 - 24551 (-)
Gene ID: k141_239373_20
Type: TF
Location: 24742 - 25635 (+)
Gene ID: k141_239373_21
Type: CAZyme
Location: 25725 - 27176 (+)
Gene ID: k141_239373_22
Type: pfam
Location: 27351 - 27674 (+)
Gene ID: k141_239373_23
Type: TC
Location: 27795 - 30722 (+)
Gene ID: k141_239373_24
Type:
Location: 30755 - 31006 (+)
Gene ID: k141_239373_25
Type: TC
Location: 31389 - 33989 (+)
Gene ID: k141_239373_26
Type: pfam
Location: 34270 - 34443 (+)
Gene ID: k141_239373_27
Type: pfam
Location: 34436 - 35671 (+)
Gene ID: k141_239373_28
Type: TC
Location: 35838 - 38051 (+)
Gene ID: k141_239373_29
Type: CAZyme
Location: 38191 - 38895 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_239373_22 vegetarian > vegan 1.40415 0.00096
k141_239373_24 vegetarian > vegan 1.37197 0.00096
k141_239373_29 vegetarian > omnivore 1.05954 0.01287

🧭 Explore Read Mapping of CGC

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