Cluster: GH030_bin.25_CGC25
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: GH030_bin.25
- CGC Family ID: CGCFAM_00704
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_73244 | k141_73244_2 | 1691 | 4114 | + | CBM48 | GH13_9 |
| TC | k141_73244 | k141_73244_3 | 4121 | 4978 | + | 1.A.23.2.1 |
| TC | k141_73244 | k141_73244_4 | 5266 | 6447 | + | 3.A.1.2.17 |
| TC | k141_73244 | k141_73244_5 | 6604 | 8148 | + | 3.A.1.2.12 |
| TC | k141_73244 | k141_73244_6 | 8153 | 9259 | + | 3.A.1.2.17 |
| TC | k141_73244 | k141_73244_7 | 9260 | 10219 | + | 3.A.1.2.12 |
| TC | k141_73244 | k141_73244_8 | 10528 | 11340 | - | 3.A.1.17.3 |
| TC | k141_73244 | k141_73244_9 | 11330 | 12097 | - | 3.A.1.17.8 |
| pfam | k141_73244 | k141_73244_10 | 12320 | 13741 | + | Lyase_1 | ASL_C2 |
| pfam | k141_73244 | k141_73244_11 | 13806 | 14891 | + | Semialdhyde_dh | Semialdhyde_dhC |
| TC | k141_73244 | k141_73244_12 | 14909 | 16627 | + | 9.B.34.1.2 |
| TC | k141_73244 | k141_73244_13 | 16768 | 18792 | + | 3.A.7.7.1 |
| NULL(UNKNOWN) | k141_73244 | k141_73244_14 | 18901 | 19566 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_73244 | k141_73244_15 | 19771 | 20796 | + | ABC_sub_bind |
| TC | k141_73244 | k141_73244_16 | 20982 | 21926 | + | 3.A.1.34.1 |
| TC | k141_73244 | k141_73244_17 | 21926 | 22729 | + | 3.A.1.34.1 |
Gene ID: k141_73244_2
Type: CAZyme
Location: 1691 - 4114 (+)
Type: CAZyme
Location: 1691 - 4114 (+)
Gene ID: k141_73244_3
Type: TC
Location: 4121 - 4978 (+)
Type: TC
Location: 4121 - 4978 (+)
Gene ID: k141_73244_4
Type: TC
Location: 5266 - 6447 (+)
Type: TC
Location: 5266 - 6447 (+)
Gene ID: k141_73244_5
Type: TC
Location: 6604 - 8148 (+)
Type: TC
Location: 6604 - 8148 (+)
Gene ID: k141_73244_6
Type: TC
Location: 8153 - 9259 (+)
Type: TC
Location: 8153 - 9259 (+)
Gene ID: k141_73244_7
Type: TC
Location: 9260 - 10219 (+)
Type: TC
Location: 9260 - 10219 (+)
Gene ID: k141_73244_8
Type: TC
Location: 10528 - 11340 (-)
Type: TC
Location: 10528 - 11340 (-)
Gene ID: k141_73244_9
Type: TC
Location: 11330 - 12097 (-)
Type: TC
Location: 11330 - 12097 (-)
Gene ID: k141_73244_10
Type: pfam
Location: 12320 - 13741 (+)
Type: pfam
Location: 12320 - 13741 (+)
Gene ID: k141_73244_11
Type: pfam
Location: 13806 - 14891 (+)
Type: pfam
Location: 13806 - 14891 (+)
Gene ID: k141_73244_12
Type: TC
Location: 14909 - 16627 (+)
Type: TC
Location: 14909 - 16627 (+)
Gene ID: k141_73244_13
Type: TC
Location: 16768 - 18792 (+)
Type: TC
Location: 16768 - 18792 (+)
Gene ID: k141_73244_14
Type:
Location: 18901 - 19566 (+)
Type:
Location: 18901 - 19566 (+)
Gene ID: k141_73244_15
Type: pfam
Location: 19771 - 20796 (+)
Type: pfam
Location: 19771 - 20796 (+)
Gene ID: k141_73244_16
Type: TC
Location: 20982 - 21926 (+)
Type: TC
Location: 20982 - 21926 (+)
Gene ID: k141_73244_17
Type: TC
Location: 21926 - 22729 (+)
Type: TC
Location: 21926 - 22729 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp934394665
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.