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Cluster: GH030_bin.25_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_19704 k141_19704_27 23775 25202 + 2.A.66.1.26
pfam k141_19704 k141_19704_28 25210 26487 + DUF3810
NULL(UNKNOWN) k141_19704 k141_19704_29 26991 27674 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_19704 k141_19704_30 28091 29575 - 9.A.11.1.1
pfam k141_19704 k141_19704_31 29835 30422 - Mntp | Mntp
TC k141_19704 k141_19704_32 30507 31664 + 2.A.45.2.6
pfam k141_19704 k141_19704_33 31687 32247 + DUF436
CAZyme k141_19704 k141_19704_34 32268 33458 - GH5_2
pfam k141_19704 k141_19704_35 33690 35177 + Methyltr_RsmB-F | Methyltranf_PUA | Methyltr_RsmF_N | Methyltr_RsmF_N | RsmF_methylt_CI
pfam k141_19704 k141_19704_36 35261 35995 + PseudoU_synth_2
TC k141_19704 k141_19704_37 36069 37196 + 2.A.86.1.9
Gene ID: k141_19704_27
Type: TC
Location: 23775 - 25202 (+)
Gene ID: k141_19704_28
Type: pfam
Location: 25210 - 26487 (+)
Gene ID: k141_19704_29
Type:
Location: 26991 - 27674 (+)
Gene ID: k141_19704_30
Type: TC
Location: 28091 - 29575 (-)
Gene ID: k141_19704_31
Type: pfam
Location: 29835 - 30422 (-)
Gene ID: k141_19704_32
Type: TC
Location: 30507 - 31664 (+)
Gene ID: k141_19704_33
Type: pfam
Location: 31687 - 32247 (+)
Gene ID: k141_19704_34
Type: CAZyme
Location: 32268 - 33458 (-)
Gene ID: k141_19704_35
Type: pfam
Location: 33690 - 35177 (+)
Gene ID: k141_19704_36
Type: pfam
Location: 35261 - 35995 (+)
Gene ID: k141_19704_37
Type: TC
Location: 36069 - 37196 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_19704_28 vegetarian > vegan 1.00099 0.00096

🧭 Explore Read Mapping of CGC

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