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Cluster: GH029_111_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_234948 k141_234948_54 66591 67454 + CE4
pfam k141_234948 k141_234948_55 67441 68262 + Polysacc_deac_1
STP k141_234948 k141_234948_56 68306 69142 + SBP_bac_3
TC k141_234948 k141_234948_57 69200 69856 + 3.A.1.3.15
TC k141_234948 k141_234948_58 69849 70574 + 3.A.1.3.15
pfam k141_234948 k141_234948_59 70586 71314 + Asp_Glu_race
TC k141_234948 k141_234948_60 72193 73494 + 1.B.23.1.23
TC k141_234948 k141_234948_61 73973 75301 + 1.B.23.1.5
TC k141_234948 k141_234948_62 75647 76861 + 1.B.23.1.5
Gene ID: k141_234948_54
Type: CAZyme
Location: 66591 - 67454 (+)
Gene ID: k141_234948_55
Type: pfam
Location: 67441 - 68262 (+)
Gene ID: k141_234948_56
Type: STP
Location: 68306 - 69142 (+)
Gene ID: k141_234948_57
Type: TC
Location: 69200 - 69856 (+)
Gene ID: k141_234948_58
Type: TC
Location: 69849 - 70574 (+)
Gene ID: k141_234948_59
Type: pfam
Location: 70586 - 71314 (+)
Gene ID: k141_234948_60
Type: TC
Location: 72193 - 73494 (+)
Gene ID: k141_234948_61
Type: TC
Location: 73973 - 75301 (+)
Gene ID: k141_234948_62
Type: TC
Location: 75647 - 76861 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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