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Cluster: GH009_1_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_319547 k141_319547_6 3253 4056 - 3.D.6.1.3
TC k141_319547 k141_319547_7 4072 4662 - 3.D.6.1.2
TC k141_319547 k141_319547_8 4659 5468 - 3.D.6.1.2
TC k141_319547 k141_319547_9 5469 6038 - 3.D.6.1.2
TC k141_319547 k141_319547_10 6040 7050 - 3.D.6.1.2
TC k141_319547 k141_319547_11 7047 8399 - 3.D.6.1.2
TC k141_319547 k141_319547_12 8448 8978 - 2.A.87.3.2
pfam k141_319547 k141_319547_13 8988 9371 - NusG_II
pfam k141_319547 k141_319547_14 9364 10377 - ApbE
CAZyme k141_319547 k141_319547_15 10374 11804 - GH20
Gene ID: k141_319547_6
Type: TC
Location: 3253 - 4056 (-)
Gene ID: k141_319547_7
Type: TC
Location: 4072 - 4662 (-)
Gene ID: k141_319547_8
Type: TC
Location: 4659 - 5468 (-)
Gene ID: k141_319547_9
Type: TC
Location: 5469 - 6038 (-)
Gene ID: k141_319547_10
Type: TC
Location: 6040 - 7050 (-)
Gene ID: k141_319547_11
Type: TC
Location: 7047 - 8399 (-)
Gene ID: k141_319547_12
Type: TC
Location: 8448 - 8978 (-)
Gene ID: k141_319547_13
Type: pfam
Location: 8988 - 9371 (-)
Gene ID: k141_319547_14
Type: pfam
Location: 9364 - 10377 (-)
Gene ID: k141_319547_15
Type: CAZyme
Location: 10374 - 11804 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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