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Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC NZ_JAJWHX010000133.1 NZ_JAJWHX010000133.1_3 1558 1881 + 4.A.3.2.6
TC NZ_JAJWHX010000133.1 NZ_JAJWHX010000133.1_4 1891 2205 + 4.A.3.2.9
TC NZ_JAJWHX010000133.1 NZ_JAJWHX010000133.1_5 2246 3652 - 2.A.1.1.113
pfam NZ_JAJWHX010000133.1 NZ_JAJWHX010000133.1_6 3915 4976 + AFG1_ATPase
CAZyme NZ_JAJWHX010000133.1 NZ_JAJWHX010000133.1_7 5011 7188 - AA2
TF NZ_JAJWHX010000133.1 NZ_JAJWHX010000133.1_8 7456 8388 - HTH_1
TC NZ_JAJWHX010000133.1 NZ_JAJWHX010000133.1_9 8488 8922 + 2.A.7.21.5
TC NZ_JAJWHX010000133.1 NZ_JAJWHX010000133.1_10 8932 9408 + 2.A.7.21.5
Gene ID: NZ_JAJWHX010000133.1_3
Type: TC
Location: 1558 - 1881 (+)
Gene ID: NZ_JAJWHX010000133.1_4
Type: TC
Location: 1891 - 2205 (+)
Gene ID: NZ_JAJWHX010000133.1_5
Type: TC
Location: 2246 - 3652 (-)
Gene ID: NZ_JAJWHX010000133.1_6
Type: pfam
Location: 3915 - 4976 (+)
Gene ID: NZ_JAJWHX010000133.1_7
Type: CAZyme
Location: 5011 - 7188 (-)
Gene ID: NZ_JAJWHX010000133.1_8
Type: TF
Location: 7456 - 8388 (-)
Gene ID: NZ_JAJWHX010000133.1_9
Type: TC
Location: 8488 - 8922 (+)
Gene ID: NZ_JAJWHX010000133.1_10
Type: TC
Location: 8932 - 9408 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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