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Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC NZ_JAJWHX010000002.1 NZ_JAJWHX010000002.1_100 105737 106726 - 3.A.1.6.1
pfam NZ_JAJWHX010000002.1 NZ_JAJWHX010000002.1_101 106878 107117 - ZapB
TC NZ_JAJWHX010000002.1 NZ_JAJWHX010000002.1_102 107566 108417 + 1.A.8.1.1
pfam NZ_JAJWHX010000002.1 NZ_JAJWHX010000002.1_103 108439 109950 + FGGY_N | FGGY_C
TC NZ_JAJWHX010000002.1 NZ_JAJWHX010000002.1_104 110065 111267 - 2.A.27.1.1
TC NZ_JAJWHX010000002.1 NZ_JAJWHX010000002.1_105 111552 112943 + 2.A.40.4.2
pfam NZ_JAJWHX010000002.1 NZ_JAJWHX010000002.1_106 113094 114791 + AsmA
TC NZ_JAJWHX010000002.1 NZ_JAJWHX010000002.1_107 115044 116603 + 4.A.1.1.16
CAZyme NZ_JAJWHX010000002.1 NZ_JAJWHX010000002.1_108 116616 117995 + GH4
Gene ID: NZ_JAJWHX010000002.1_100
Type: TC
Location: 105737 - 106726 (-)
Gene ID: NZ_JAJWHX010000002.1_101
Type: pfam
Location: 106878 - 107117 (-)
Gene ID: NZ_JAJWHX010000002.1_102
Type: TC
Location: 107566 - 108417 (+)
Gene ID: NZ_JAJWHX010000002.1_103
Type: pfam
Location: 108439 - 109950 (+)
Gene ID: NZ_JAJWHX010000002.1_104
Type: TC
Location: 110065 - 111267 (-)
Gene ID: NZ_JAJWHX010000002.1_105
Type: TC
Location: 111552 - 112943 (+)
Gene ID: NZ_JAJWHX010000002.1_106
Type: pfam
Location: 113094 - 114791 (+)
Gene ID: NZ_JAJWHX010000002.1_107
Type: TC
Location: 115044 - 116603 (+)
Gene ID: NZ_JAJWHX010000002.1_108
Type: CAZyme
Location: 116616 - 117995 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
NZ_JAJWHX010000002.1_106 vegetarian > omnivore 1.26303 0.02460

🧭 Explore Read Mapping of CGC

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