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Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_7 5904 6986 + 3.A.1.14.5
TC NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_8 6983 7780 + 3.A.1.14.3
TC NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_9 7821 8963 - 8.A.1.1.4
TC NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_10 8963 9307 - 9.B.32.1.3
pfam NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_11 9443 10219 - HTH_46
STP NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_12 10323 11246 + PfkB
TC NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_13 11412 12929 + 1.B.3.1.2
TC NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_14 13034 14404 + 4.A.1.2.1
CAZyme NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_15 14404 15804 + GH32
TF NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_16 15834 16838 + LacI
NULL(UNKNOWN) NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_17 16854 17519 - NULL(UNKNOWN)
[View Structural Homologs]
TC NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_18 17680 18711 - 3.A.1.2.15
TC NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_19 18722 20206 - 3.A.1.2.3
TC NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_20 20239 21162 - 3.A.1.2.15
TF NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_21 21593 22627 - LacI
pfam NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_22 22714 23721 + GFO_IDH_MocA | GFO_IDH_MocA_C | Sacchrp_dh_NADP | F420_oxidored | GFO_IDH_MocA_C3
CAZyme NZ_JAJWHX010000027.1 NZ_JAJWHX010000027.1_23 24105 25136 - GH179
Gene ID: NZ_JAJWHX010000027.1_7
Type: TC
Location: 5904 - 6986 (+)
Gene ID: NZ_JAJWHX010000027.1_8
Type: TC
Location: 6983 - 7780 (+)
Gene ID: NZ_JAJWHX010000027.1_9
Type: TC
Location: 7821 - 8963 (-)
Gene ID: NZ_JAJWHX010000027.1_10
Type: TC
Location: 8963 - 9307 (-)
Gene ID: NZ_JAJWHX010000027.1_11
Type: pfam
Location: 9443 - 10219 (-)
Gene ID: NZ_JAJWHX010000027.1_12
Type: STP
Location: 10323 - 11246 (+)
Gene ID: NZ_JAJWHX010000027.1_13
Type: TC
Location: 11412 - 12929 (+)
Gene ID: NZ_JAJWHX010000027.1_14
Type: TC
Location: 13034 - 14404 (+)
Gene ID: NZ_JAJWHX010000027.1_15
Type: CAZyme
Location: 14404 - 15804 (+)
Gene ID: NZ_JAJWHX010000027.1_16
Type: TF
Location: 15834 - 16838 (+)
Gene ID: NZ_JAJWHX010000027.1_17
Type:
Location: 16854 - 17519 (-)
Gene ID: NZ_JAJWHX010000027.1_18
Type: TC
Location: 17680 - 18711 (-)
Gene ID: NZ_JAJWHX010000027.1_19
Type: TC
Location: 18722 - 20206 (-)
Gene ID: NZ_JAJWHX010000027.1_20
Type: TC
Location: 20239 - 21162 (-)
Gene ID: NZ_JAJWHX010000027.1_21
Type: TF
Location: 21593 - 22627 (-)
Gene ID: NZ_JAJWHX010000027.1_22
Type: pfam
Location: 22714 - 23721 (+)
Gene ID: NZ_JAJWHX010000027.1_23
Type: CAZyme
Location: 24105 - 25136 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
NZ_JAJWHX010000027.1_15 vegetarian > vegan 2.10298 0.01684

🧭 Explore Read Mapping of CGC

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