dbCAN Logo

Cluster: GCF_021624045.1_ASM2162404v1_genomic_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC NZ_JAJWHX010000020.1 NZ_JAJWHX010000020.1_16 16175 18184 - 5.A.1.5.1
NULL(UNKNOWN) NZ_JAJWHX010000020.1 NZ_JAJWHX010000020.1_17 18234 18593 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme NZ_JAJWHX010000020.1 NZ_JAJWHX010000020.1_18 18718 20151 - GH1
TF NZ_JAJWHX010000020.1 NZ_JAJWHX010000020.1_19 20271 21026 - HTH_6
pfam NZ_JAJWHX010000020.1 NZ_JAJWHX010000020.1_20 21050 21361 + ASCH
TC NZ_JAJWHX010000020.1 NZ_JAJWHX010000020.1_21 21525 22184 + 1.C.113.1.10
Gene ID: NZ_JAJWHX010000020.1_16
Type: TC
Location: 16175 - 18184 (-)
Gene ID: NZ_JAJWHX010000020.1_17
Type:
Location: 18234 - 18593 (-)
Gene ID: NZ_JAJWHX010000020.1_18
Type: CAZyme
Location: 18718 - 20151 (-)
Gene ID: NZ_JAJWHX010000020.1_19
Type: TF
Location: 20271 - 21026 (-)
Gene ID: NZ_JAJWHX010000020.1_20
Type: pfam
Location: 21050 - 21361 (+)
Gene ID: NZ_JAJWHX010000020.1_21
Type: TC
Location: 21525 - 22184 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
NZ_JAJWHX010000020.1_16 vegetarian > omnivore 1.95741 0.02831
NZ_JAJWHX010000020.1_17 vegetarian > omnivore 2.46581 0.02460
NZ_JAJWHX010000020.1_17 vegetarian > vegan 3.51193 0.01684
NZ_JAJWHX010000020.1_18 vegan > omnivore 1.46164 0.00455
NZ_JAJWHX010000020.1_18 vegetarian > omnivore 1.37135 0.02460
NZ_JAJWHX010000020.1_19 vegetarian > omnivore 1.86876 0.02460

🧭 Explore Read Mapping of CGC

← Back to Cluster List